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DHRSX dehydrogenase/reductase X-linked [ Sus scrofa (pig) ]

Gene ID: 110255319, updated on 15-Mar-2024

Summary

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Gene symbol
DHRSX
Gene description
dehydrogenase/reductase X-linked
See related
Ensembl:ENSSSCG00000039144
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Annotation information
Annotation category: partial on reference assembly
Expression
Ubiquitous expression in liver (RPKM 11.5), kidney (RPKM 9.8) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Y
Exon count:
6
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) Y NC_010462.3 (5248447..5374873, complement)

Chromosome Y - NC_010462.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110257901 Neighboring gene cytokine receptor-like factor 2 Neighboring gene granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like Neighboring gene uncharacterized LOC110257932 Neighboring gene uncharacterized LOC110257933

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010462.3 Chromosome Y Reference Sscrofa11.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
dehydrogenase/reductase SDR family member on chromosome X

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010462.3 Reference Sscrofa11.1 Primary Assembly

    Range
    5248447..5374873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021080887.1 → XP_020936546.1  dehydrogenase/reductase SDR family member on chromosome X

    UniProtKB/TrEMBL
    A0A480JXR3, A0A480K192, A0A480SEW4, A0A480SGY0, A0A4X1TS91
    Related
    ENSSSCP00000077344.1, ENSSSCT00000100226.1
    Conserved Domains (1) summary
    cd05327
    Location:43 → 316
    retinol-DH_like_SDR_c_like; retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs
Nucleotide Protein
Heading Accession and Version

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