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SFMBT2 Scm like with four mbt domains 2 [ Phascolarctos cinereus (koala) ]

Gene ID: 110193346, updated on 15-Mar-2024

Summary

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Gene symbol
SFMBT2
Gene description
Scm like with four mbt domains 2
See related
Ensembl:ENSPCIG00000017345
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344109.1 (2885661..3187826)

NW_018344109.1Genomic Context describing neighboring genes Neighboring gene inter-alpha-trypsin inhibitor heavy chain 2 Neighboring gene inter-alpha-trypsin inhibitor heavy chain 5 Neighboring gene uncharacterized LOC110193347 Neighboring gene protein kinase C theta Neighboring gene uncharacterized LOC110193343

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018344109 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scm-like with four MBT domains protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344109.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    2885661..3187826
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020965056.1 → XP_020820715.1  scm-like with four MBT domains protein 2

    UniProtKB/TrEMBL
    A0A6P5IFE7
    Related
    ENSPCIP00000051314.1, ENSPCIT00000066428.1
    Conserved Domains (3) summary
    cd09581
    Location:815 → 894
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:49 → 145
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam12140
    Location:529 → 644
    SLED; SLED domain

  2. XM_020965058.1 → XP_020820717.1  scm-like with four MBT domains protein 2

    UniProtKB/TrEMBL
    A0A6P5IFE7
    Related
    ENSPCIP00000044571.1, ENSPCIT00000064666.1
    Conserved Domains (3) summary
    cd09581
    Location:815 → 894
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:49 → 145
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam12140
    Location:529 → 644
    SLED; SLED domain

  3. XM_020965057.1 → XP_020820716.1  scm-like with four MBT domains protein 2

    UniProtKB/TrEMBL
    A0A6P5IFE7
    Related
    ENSPCIP00000022853.1, ENSPCIT00000028209.2
    Conserved Domains (3) summary
    cd09581
    Location:815 → 894
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:49 → 145
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam12140
    Location:529 → 644
    SLED; SLED domain
Nucleotide Protein
Heading Accession and Version

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