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TRIM34 tripartite motif containing 34 [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110138040, updated on 15-Mar-2024

Summary

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Gene symbol
TRIM34
Gene description
tripartite motif containing 34
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018334763.1 (231870..244340)

NW_018334763.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 6 Neighboring gene olfactory receptor 52B4-like Neighboring gene doublesex and mab-3 related transcription factor 1 Neighboring gene doublesex and mab-3 related transcription factor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018334763 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tripartite motif-containing protein 34

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018334763.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    231870..244340
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020894774.1 → XP_020750433.1  tripartite motif-containing protein 34

    UniProtKB/TrEMBL
    A0A6J0XKQ5
    Conserved Domains (5) summary
    cd00021
    Location:95 → 132
    BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
    cd16591
    Location:12 → 60
    RING-HC_TRIM5_like-C-IV; RING finger, HC subclass, found in tripartite motif-containing proteins TRIM5, TRIM6, TRIM22, TRIM34 and similar proteins
    cl02614
    Location:299 → 486
    SPRY; SPRY domain
    cl25732
    Location:134 → 255
    SMC_N; RecF/RecN/SMC N terminal domain
    cl26079
    Location:79 → 193
    KpsE; Capsule polysaccharide export protein KpsE/RkpR [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version

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