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HOXA13 homeobox A13 [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110129386, updated on 15-Mar-2024

Summary

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Gene symbol
HOXA13
Gene description
homeobox A13
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018341497.1 (149559..152948)

NW_018341497.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110129375 Neighboring gene even-skipped homeobox 1 Neighboring gene uncharacterized LOC110129387 Neighboring gene homeobox A11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018341497 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: homeobox protein Hox-A13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018341497.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    149559..152948
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020880731.1 → XP_020736390.1  LOW QUALITY PROTEIN: homeobox protein Hox-A13

    UniProtKB/TrEMBL
    A0A6J0WIV6
    Conserved Domains (2) summary
    smart00389
    Location:238 → 294
    HOX; Homeodomain
    pfam12284
    Location:67 → 138
    HoxA13_N; Hox protein A13 N terminal
Nucleotide Protein
Heading Accession and Version

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