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CPEB3 cytoplasmic polyadenylation element binding protein 3 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110073580, updated on 15-Mar-2024

Summary

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Gene symbol
CPEB3
Gene description
cytoplasmic polyadenylation element binding protein 3
See related
Ensembl:ENSPVIG00000021194
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150738.1 (924307..1039940)

NW_018150738.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 11 Neighboring gene uncharacterized LOC110073579 Neighboring gene insulin degrading enzyme Neighboring gene membrane associated ring-CH-type finger 5 Neighboring gene B-TFIID TATA-box binding protein associated factor 1 Neighboring gene uncharacterized LOC110073586

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018150738.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA regulatory element binding translation repressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation factor activity, RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of messenger ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic polyadenylation element-binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150738.1 Reference pvi1.1

    Range
    924307..1039940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020782924.1 → XP_020638583.1  cytoplasmic polyadenylation element-binding protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0SY01
    Conserved Domains (3) summary
    cd12724
    Location:416 → 507
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:524 → 604
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:599 → 660
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  2. XM_020782920.1 → XP_020638579.1  cytoplasmic polyadenylation element-binding protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0SY01
    Related
    ENSPVIP00000028640.1, ENSPVIT00000035134.1
    Conserved Domains (3) summary
    cd12724
    Location:416 → 507
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:524 → 604
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:599 → 660
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  3. XM_020782918.1 → XP_020638577.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A6J0SQG5
    Conserved Domains (3) summary
    cd12724
    Location:424 → 515
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:532 → 612
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:607 → 668
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  4. XM_020782927.1 → XP_020638586.1  cytoplasmic polyadenylation element-binding protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A6J0SQD5
    Conserved Domains (3) summary
    cd12724
    Location:416 → 507
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:524 → 604
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:599 → 660
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  5. XM_020782928.1 → XP_020638587.1  cytoplasmic polyadenylation element-binding protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A6J0SQH5
    Conserved Domains (3) summary
    cd12724
    Location:401 → 492
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:509 → 589
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:584 → 645
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  6. XM_020782929.1 → XP_020638588.1  cytoplasmic polyadenylation element-binding protein 3 isoform X6

    UniProtKB/TrEMBL
    A0A6J0SUA7
    Related
    ENSPVIP00000028649.1, ENSPVIT00000035143.1
    Conserved Domains (3) summary
    cd12724
    Location:393 → 484
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:501 → 581
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:576 → 637
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  7. XM_020782919.1 → XP_020638578.1  cytoplasmic polyadenylation element-binding protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A6J0SU96
    Related
    ENSPVIP00000028643.1, ENSPVIT00000035137.1
    Conserved Domains (3) summary
    cd12724
    Location:422 → 513
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:530 → 610
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:605 → 666
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  8. XM_020782925.1 → XP_020638584.1  cytoplasmic polyadenylation element-binding protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0SY01
    Conserved Domains (3) summary
    cd12724
    Location:416 → 507
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:524 → 604
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:599 → 660
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  9. XM_020782921.1 → XP_020638580.1  cytoplasmic polyadenylation element-binding protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0SY01
    Related
    ENSPVIP00000028645.1, ENSPVIT00000035139.1
    Conserved Domains (3) summary
    cd12724
    Location:416 → 507
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:524 → 604
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:599 → 660
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  10. XM_020782931.1 → XP_020638590.1  cytoplasmic polyadenylation element-binding protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0SY01
    Conserved Domains (3) summary
    cd12724
    Location:416 → 507
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:524 → 604
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:599 → 660
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  11. XM_020782922.1 → XP_020638581.1  cytoplasmic polyadenylation element-binding protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0SY01
    Conserved Domains (3) summary
    cd12724
    Location:416 → 507
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:524 → 604
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:599 → 660
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  12. XM_020782923.1 → XP_020638582.1  cytoplasmic polyadenylation element-binding protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0SY01
    Conserved Domains (3) summary
    cd12724
    Location:416 → 507
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:524 → 604
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:599 → 660
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  13. XM_020782930.1 → XP_020638589.1  cytoplasmic polyadenylation element-binding protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0SY01
    Related
    ENSPVIP00000028647.1, ENSPVIT00000035141.1
    Conserved Domains (3) summary
    cd12724
    Location:416 → 507
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:524 → 604
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:599 → 660
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
Nucleotide Protein
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