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TRA2A transformer 2 alpha homolog [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110072588, updated on 15-Mar-2024

Summary

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Gene symbol
TRA2A
Gene description
transformer 2 alpha homolog
See related
Ensembl:ENSPVIG00000016296
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See TRA2A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150696.1 (4350940..4368102)

NW_018150696.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 221 member A Neighboring gene coiled-coil domain containing 126 Neighboring gene insulin like growth factor 2 mRNA binding protein 3 Neighboring gene mitochondrial assembly of ribosomal large subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018150696.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transformer-2 protein homolog alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150696.1 Reference pvi1.1

    Range
    4350940..4368102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020781068.1 → XP_020636727.1  transformer-2 protein homolog alpha isoform X1

    UniProtKB/TrEMBL
    A0A6J0SK25
    Conserved Domains (1) summary
    cd12363
    Location:121 → 198
    RRM_TRA2; RNA recognition motif in transformer-2 protein homolog TRA2-alpha, TRA2-beta and similar proteins

  2. XM_020781076.1 → XP_020636735.1  transformer-2 protein homolog alpha isoform X2

    UniProtKB/TrEMBL
    A0A6J0SP52
    Related
    ENSPVIP00000021450.1, ENSPVIT00000026627.1
    Conserved Domains (1) summary
    cd12363
    Location:116 → 195
    RRM_TRA2; RNA recognition motif (RRM) found in transformer-2 protein homolog TRA2-alpha, TRA2-beta and similar proteins
Nucleotide Protein
Heading Accession and Version

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