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lrrc1 leucine rich repeat containing 1 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109999755, updated on 14-Mar-2024

Summary

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Gene symbol
lrrc1
Gene description
leucine rich repeat containing 1
See related
Ensembl:ENSLBEG00000002099
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018115009.1 (147045..178767)

NW_018115009.1Genomic Context describing neighboring genes Neighboring gene kelch-like family member 31 Neighboring gene elongin A, like Neighboring gene protein scribble homolog Neighboring gene muscular LMNA-interacting protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018115009 Unplaced Scaffold Reference BallGen_V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter receptor transport postsynaptic membrane to endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter receptor transport, endosome to postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Labrus bergylta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BallGen_V1

Genomic

  1. NW_018115009.1 Reference BallGen_V1

    Range
    147045..178767
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020654882.2 → XP_020510538.1  leucine-rich repeat-containing protein 1

    UniProtKB/TrEMBL
    A0A3Q3E6R8
    Related
    ENSLBEP00000002708.1, ENSLBET00000002861.1
    Conserved Domains (2) summary
    sd00033
    Location:14 → 37
    LRR_RI; leucine-rich repeat [structural motif]
    cl26018
    Location:26 → 314
    NEL; C-terminal novel E3 ligase, LRR-interacting
Nucleotide Protein
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