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ptpn3 protein tyrosine phosphatase non-receptor type 3 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109997427, updated on 1-Aug-2024

Summary

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Gene symbol
ptpn3
Gene description
protein tyrosine phosphatase non-receptor type 3
See related
Ensembl:ENSLBEG00000003546
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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See ptpn3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 8 NC_089202.1 (11405324..11420879)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114831.1 (428919..444397, complement)

Chromosome 8 - NC_089202.1Genomic Context describing neighboring genes Neighboring gene L3MBTL histone methyl-lysine binding protein 1b Neighboring gene putative transmembrane protein 244 Neighboring gene serum/glucocorticoid regulated kinase 2b Neighboring gene erythrocyte membrane protein band 4.1 like 4B Neighboring gene epithelial splicing regulatory protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089202.1 Reference fLabBer1.1

    Range
    11405324..11420879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020651918.3 → XP_020507574.2  tyrosine-protein phosphatase non-receptor type 3

    UniProtKB/TrEMBL
    A0A3Q3L6R9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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