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vps35l VPS35 endosomal protein sorting factor like [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109992258, updated on 26-Jun-2024

Summary

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Gene symbol
vps35l
Gene description
VPS35 endosomal protein sorting factor like
See related
Ensembl:ENSLBEG00000000865
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Also known as
cunh16orf62
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 21
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 21 NC_089215.1 (19182915..19196137)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114640.1 (385515..398498)

Chromosome 21 - NC_089215.1Genomic Context describing neighboring genes Neighboring gene MMS19 homolog, cytosolic iron-sulfur assembly component Neighboring gene zinc finger DHHC-type palmitoyltransferase 16b Neighboring gene guided entry of tail-anchored proteins factor 4 Neighboring gene transmembrane protein 238-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VPS35 endosomal protein-sorting factor-like
Names
chromosome unknown C16orf62 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089215.1 Reference fLabBer1.1

    Range
    19182915..19196137
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020644785.3 → XP_020500441.1  VPS35 endosomal protein-sorting factor-like

    UniProtKB/TrEMBL
    A0A3Q3E1R4, A0A3Q3KWI5
    Related
    ENSLBEP00000001225.1

RNA

  1. XR_010664906.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases