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cacybp calcyclin binding protein [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109991442, updated on 26-Jun-2024

Summary

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Gene symbol
cacybp
Gene description
calcyclin binding protein
See related
Ensembl:ENSLBEG00000017663
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 4 NC_089198.1 (20974270..20978394, complement)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114619.1 (246152..250227, complement)

Chromosome 4 - NC_089198.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2B, subunit 3 gamma Neighboring gene polo-like kinase 3 (Drosophila) Neighboring gene mitochondrial ribosomal protein S14 Neighboring gene tenascin N

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S100 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcyclin-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089198.1 Reference fLabBer1.1

    Range
    20974270..20978394 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020643728.3 → XP_020499384.1  calcyclin-binding protein

    UniProtKB/TrEMBL
    A0A3Q3FSZ5
    Related
    ENSLBEP00000023032.1
    Conserved Domains (3) summary
    cd06468
    Location:73 → 164
    p23_CacyBP; p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP). CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter ...
    pfam09032
    Location:7 → 73
    Siah-Interact_N; Siah interacting protein, N terminal
    cl27091
    Location:158 → 214
    SGS; SGS domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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