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ubxn2a UBX domain protein 2A [ Monopterus albus (swamp eel) ]

Gene ID: 109962140, updated on 14-Mar-2024

Summary

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Gene symbol
ubxn2a
Gene description
UBX domain protein 2A
See related
Ensembl:ENSMALG00000018437
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018127942.1 (2418488..2422948)

NW_018127942.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109962244 Neighboring gene ATPase family AAA domain containing 2B Neighboring gene MFSD2 lysolipid transporter B, sphingolipid Neighboring gene WD repeat and coiled coil containing Neighboring gene FKBP prolyl isomerase 1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018127942.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018127942.1 Reference M_albus_1.0 Primary Assembly

    Range
    2418488..2422948
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020603585.1 → XP_020459241.1  UBX domain-containing protein 2A isoform X1

    UniProtKB/TrEMBL
    A0A3Q3K1I3
    Related
    ENSMALP00000026559.1, ENSMALT00000027044.1
    Conserved Domains (2) summary
    pfam08059
    Location:54 → 128
    SEP; SEP domain
    cl00155
    Location:163 → 235
    UBQ; Ubiquitin-like proteins

  2. XM_020603586.1 → XP_020459242.1  UBX domain-containing protein 2A isoform X2

    Conserved Domains (2) summary
    pfam08059
    Location:31 → 105
    SEP; SEP domain
    cl00155
    Location:140 → 212
    UBQ; Ubiquitin-like proteins
Nucleotide Protein
Heading Accession and Version

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