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alox5a arachidonate 5-lipoxygenase a [ Rhincodon typus (whale shark) ]

Gene ID: 109921931, updated on 14-Mar-2024

Summary

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Gene symbol
alox5a
Gene description
arachidonate 5-lipoxygenase a
See related
EnsemblRapid:ENSRTYG00015002676
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Also known as
alox5
Orthologs
human zebrafish all
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Genomic context

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See alox5a in Genome Data Viewer
Location:
chromosome: 34
Exon count:
14
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 34 NC_063365.1 (1135101..1185410, complement)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018043193.1 (3792..41649)

Chromosome 34 - NC_063365.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat-containing protein 20-like Neighboring gene transforming growth factor beta regulator 1 Neighboring gene tolloid-like protein 2 Neighboring gene transmembrane 9 superfamily member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate 5-lipoxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in linoleic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyunsaturated fatty acid 5-lipoxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063365.1 Reference sRhiTyp1.1

    Range
    1135101..1185410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048616358.1 → XP_048472315.1  polyunsaturated fatty acid 5-lipoxygenase isoform X1

    Related
    ENSRTYP00015004071.1, ENSRTYT00015004512.1

  2. XM_048616359.1 → XP_048472316.1  polyunsaturated fatty acid 5-lipoxygenase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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