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nectin3b nectin cell adhesion molecule 3b [ Rhincodon typus (whale shark) ]

Gene ID: 109914694, updated on 12-Sep-2024

Summary

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Gene symbol
nectin3b
Gene description
nectin cell adhesion molecule 3b
See related
EnsemblRapid:ENSRTYG00015004582
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Also known as
nectin3
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 6 NC_063337.1 (96910507..97025155, complement)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018033753.1 (47531..157405, complement)

Chromosome 6 - NC_063337.1Genomic Context describing neighboring genes Neighboring gene T-cell surface protein tactile Neighboring gene nectin-1-like Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene uncharacterized protein C3orf85-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical junction complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nectin-3-like protein
Names
nectin cell adhesion molecule 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063337.1 Reference sRhiTyp1.1

    Range
    96910507..97025155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020514303.2 → XP_020369892.1  nectin-3-like protein

    Related
    ENSRTYP00015007030.1, ENSRTYT00015007746.1
    Conserved Domains (1) summary
    cl11960
    Location:39 → 134
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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