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gtpbp10 GTP-binding protein 10 (putative) [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109901370, updated on 14-Mar-2024

Summary

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Gene symbol
gtpbp10
Gene description
GTP-binding protein 10 (putative)
See related
Ensembl:ENSOKIG00005013218
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG13
Exon count:
10
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG13 NC_034186.2 (76971706..76978830)
100 previous assembly Okis_V1 (GCF_002021735.1) LG2 NC_034175.1 (2181964..2192432, complement)

Linkage Group LG13 - NC_034186.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116353156 Neighboring gene uncharacterized LOC116353157 Neighboring gene oxidative stress-induced growth inhibitor 2-like Neighboring gene disintegrin and metalloproteinase domain-containing protein 22-like Neighboring gene claudin-12-like Neighboring gene protein DBF4 homolog A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GTP-binding protein 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034186.2 Reference Okis_V2 Primary Assembly

    Range
    76971706..76978830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031787487.1 → XP_031643347.1  GTP-binding protein 10

    UniProtKB/TrEMBL
    A0A8C7FPN0, A0A8C7FQ89
    Related
    ENSOKIP00005031452.1, ENSOKIT00005033239.1
    Conserved Domains (1) summary
    TIGR02729
    Location:15 → 336
    Obg_CgtA; Obg family GTPase CgtA
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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