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dnajc3a DnaJ (Hsp40) homolog, subfamily C, member 3a [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109867177, updated on 14-Mar-2024

Summary

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Gene symbol
dnajc3a
Gene description
DnaJ (Hsp40) homolog, subfamily C, member 3a
See related
Ensembl:ENSOKIG00005036383
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
dnajc3
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG2
Exon count:
12
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG2 NC_034175.2 (45174887..45188164, complement)
100 previous assembly Okis_V1 (GCF_002021735.1) LG2 NC_034175.1 (43529569..43542478, complement)

Linkage Group LG2 - NC_034175.2Genomic Context describing neighboring genes Neighboring gene 2-oxoglutarate receptor 1-like Neighboring gene heparan-sulfate 6-O-sulfotransferase 3-B-like Neighboring gene UDP-glucose glycoprotein glucosyltransferase 2 Neighboring gene claudin-10 Neighboring gene claudin 10-like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables misfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-folding chaperone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily C member 3
Names
DnaJ heat shock protein family (Hsp40) member C3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034175.2 Reference Okis_V2 Primary Assembly

    Range
    45174887..45188164 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020456172.2 → XP_020311761.1  dnaJ homolog subfamily C member 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C7MWX9
    Related
    ENSOKIP00005084476.1, ENSOKIT00005090276.1
    Conserved Domains (3) summary
    COG0484
    Location:392 → 498
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    TIGR00990
    Location:40 → 402
    3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
    sd00006
    Location:37 → 64
    TPR; TPR repeat [structural motif]

  2. XM_031795878.1 → XP_031651738.1  dnaJ homolog subfamily C member 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C7MWX9
    Conserved Domains (3) summary
    COG0484
    Location:392 → 536
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    TIGR00990
    Location:40 → 402
    3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
    sd00006
    Location:37 → 64
    TPR; TPR repeat [structural motif]

  3. XM_020456179.2 → XP_020311768.1  dnaJ homolog subfamily C member 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C7J9M2
    Related
    ENSOKIP00005084456.1, ENSOKIT00005090250.1
    Conserved Domains (3) summary
    COG0484
    Location:351 → 457
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    TIGR00990
    Location:26 → 361
    3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
    sd00006
    Location:28 → 58
    TPR; TPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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