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Rab7a RAB7A, member RAS oncogene family [ Castor canadensis (American beaver) ]

Gene ID: 109696482, updated on 14-Mar-2024

Summary

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Gene symbol
Rab7a
Gene description
RAB7A, member RAS oncogene family
See related
Ensembl:ENSCCNG00000020627
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Also known as
RAB7
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871837.1 (252620..316712, complement)

NW_017871837.1Genomic Context describing neighboring genes Neighboring gene histone H1x Neighboring gene translation initiation factor IF-2-like Neighboring gene 5-hydroxymethylcytosine binding, ES cell specific Neighboring gene ribophorin I Neighboring gene GATA binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871837.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagosome-lysosome fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-7a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871837.1 Reference C.can genome v1.0

    Range
    252620..316712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020179549.1 → XP_020035138.1  ras-related protein Rab-7a

    UniProtKB/TrEMBL
    A0A250YCC6
    Conserved Domains (1) summary
    cd01862
    Location:9 → 179
    Rab7; Rab GTPase family 7 (Rab7)

  2. XM_020179550.1 → XP_020035139.1  ras-related protein Rab-7a

    UniProtKB/TrEMBL
    A0A250YCC6
    Related
    ENSCCNP00000020795.1, ENSCCNT00000026821.1
    Conserved Domains (1) summary
    cd01862
    Location:9 → 179
    Rab7; Rab GTPase family 7 (Rab7)
Nucleotide Protein
Heading Accession and Version

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