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Dcp1a decapping mRNA 1A [ Castor canadensis (American beaver) ]

Gene ID: 109693716, updated on 14-Mar-2024

Summary

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Gene symbol
Dcp1a
Gene description
decapping mRNA 1A
See related
Ensembl:ENSCCNG00000030744
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871403.1 (78093..131219)

NW_017871403.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L23a pseudogene Neighboring gene transketolase Neighboring gene protein kinase C delta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871403.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enzyme activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in deadenylation-dependent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deadenylation-independent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mRNA-decapping enzyme 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871403.1 Reference C.can genome v1.0

    Range
    78093..131219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020175200.1 → XP_020030789.1  mRNA-decapping enzyme 1A

    UniProtKB/TrEMBL
    A0A8B7VI62, A0A8C0XT78
    Related
    ENSCCNP00000032397.1, ENSCCNT00000040679.1
    Conserved Domains (2) summary
    cd09804
    Location:6 → 126
    Dcp1; mRNA decapping enzyme 1 (Dcp1)
    pfam16741
    Location:539 → 581
    mRNA_decap_C; mRNA-decapping enzyme C-terminus
Nucleotide Protein
Heading Accession and Version

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