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Il1r1 interleukin 1 receptor type 1 [ Castor canadensis (American beaver) ]

Gene ID: 109682273, updated on 14-Mar-2024

Summary

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Gene symbol
Il1r1
Gene description
interleukin 1 receptor type 1
See related
Ensembl:ENSCCNG00000024302
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017869975.1 (916460..992288, complement)

NW_017869975.1Genomic Context describing neighboring genes Neighboring gene interleukin 1 receptor like 1 Neighboring gene interleukin 1 receptor like 2 Neighboring gene translin-associated protein X pseudogene Neighboring gene interleukin 1 receptor type 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017869975.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables interleukin-1, type I, activating receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interleukin-1 receptor type 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017869975.1 Reference C.can genome v1.0

    Range
    916460..992288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020157396.1 → XP_020012985.1  interleukin-1 receptor type 1 isoform X1

    UniProtKB/TrEMBL
    A0A250YJY1, A0A8C0ZWS0
    Related
    ENSCCNP00000024840.1, ENSCCNT00000031647.1
    Conserved Domains (4) summary
    smart00255
    Location:385 → 539
    TIR; Toll - interleukin 1 - resistance
    smart00410
    Location:233 → 327
    IG_like; Immunoglobulin like
    cd05757
    Location:127 → 218
    Ig2_IL1R_like; Second immunoglobulin (Ig)-like domain of interleukin-1 receptor (IL1R) and similar proteins
    cl11960
    Location:24 → 112
    Ig; Immunoglobulin domain

  2. XM_020157397.1 → XP_020012986.1  interleukin-1 receptor type 1 isoform X1

    UniProtKB/TrEMBL
    A0A250YJY1, A0A8C0ZWS0
    Conserved Domains (4) summary
    smart00255
    Location:385 → 539
    TIR; Toll - interleukin 1 - resistance
    smart00410
    Location:233 → 327
    IG_like; Immunoglobulin like
    cd05757
    Location:127 → 218
    Ig2_IL1R_like; Second immunoglobulin (Ig)-like domain of interleukin-1 receptor (IL1R) and similar proteins
    cl11960
    Location:24 → 112
    Ig; Immunoglobulin domain

  3. XM_020157398.1 → XP_020012987.1  interleukin-1 receptor type 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B7U1H9, A0A8C0ZWS0
    Related
    ENSCCNP00000024846.1, ENSCCNT00000031653.1
    Conserved Domains (4) summary
    smart00255
    Location:373 → 483
    TIR; Toll - interleukin 1 - resistance
    smart00410
    Location:233 → 327
    IG_like; Immunoglobulin like
    cd05757
    Location:127 → 218
    Ig2_IL1R_like; Second immunoglobulin (Ig)-like domain of interleukin-1 receptor (IL1R) and similar proteins
    cl11960
    Location:24 → 112
    Ig; Immunoglobulin domain

  4. XM_020157395.1 → XP_020012984.1  interleukin-1 receptor type 1 isoform X1

    UniProtKB/TrEMBL
    A0A250YJY1, A0A8C0ZWS0
    Conserved Domains (4) summary
    smart00255
    Location:385 → 539
    TIR; Toll - interleukin 1 - resistance
    smart00410
    Location:233 → 327
    IG_like; Immunoglobulin like
    cd05757
    Location:127 → 218
    Ig2_IL1R_like; Second immunoglobulin (Ig)-like domain of interleukin-1 receptor (IL1R) and similar proteins
    cl11960
    Location:24 → 112
    Ig; Immunoglobulin domain
Nucleotide Protein
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