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Eif5a eukaryotic translation initiation factor 5A [ Castor canadensis (American beaver) ]

Gene ID: 109674633, updated on 14-Mar-2024

Summary

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Gene symbol
Eif5a
Gene description
eukaryotic translation initiation factor 5A
See related
Ensembl:ENSCCNG00000016680
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Eif5a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017869770.1 (423456..429142)

NW_017869770.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 2 member 4 Neighboring gene Y-box binding protein 2 Neighboring gene G protein pathway suppressor 2 Neighboring gene neuralized E3 ubiquitin protein ligase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017869770.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translational termination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 5A-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017869770.1 Reference C.can genome v1.0

    Range
    423456..429142
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020151566.1 → XP_020007155.1  eukaryotic translation initiation factor 5A-1

    UniProtKB/TrEMBL
    A0A250YAF7
    Related
    ENSCCNP00000016398.1, ENSCCNT00000021363.1
    Conserved Domains (1) summary
    cl30809
    Location:1 → 150
    PLN03107; eukaryotic translation initiation factor 5A; Provisional

  2. XM_020151574.1 → XP_020007163.1  eukaryotic translation initiation factor 5A-1

    UniProtKB/TrEMBL
    A0A250YAF7
    Conserved Domains (1) summary
    cl30809
    Location:1 → 150
    PLN03107; eukaryotic translation initiation factor 5A; Provisional

  3. XM_020151581.1 → XP_020007170.1  eukaryotic translation initiation factor 5A-1

    UniProtKB/TrEMBL
    A0A250YAF7
    Conserved Domains (1) summary
    cl30809
    Location:1 → 150
    PLN03107; eukaryotic translation initiation factor 5A; Provisional
Nucleotide Protein
Heading Accession and Version

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