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plcg2 phospholipase C, gamma 2 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109641214, updated on 14-Mar-2024

Summary

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Gene symbol
plcg2
Gene description
phospholipase C, gamma 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Also known as
PLC-gamma2
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859818.1 (164440..182834, complement)

NW_017859818.1Genomic Context describing neighboring genes Neighboring gene gigaxonin Neighboring gene c-Maf inducing protein Neighboring gene MTOR associated protein, eak-7 homolog Neighboring gene coactosin-like F-actin binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859818.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of epithelial cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859818.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    164440..182834 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020105595.1 → XP_019961154.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2

    UniProtKB/TrEMBL
    S5GIU5
    Conserved Domains (10) summary
    cd00275
    Location:1052 → 1177
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08592
    Location:309 → 462
    PI-PLCc_gamma; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma
    cd09932
    Location:630 → 734
    SH2_C-SH2_PLC_gamma_like; C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma
    cd10341
    Location:515 → 616
    SH2_N-SH2_PLC_gamma_like; N-terminal Src homology 2 (N-SH2) domain in Phospholipase C gamma
    cd13362
    Location:22 → 138
    PH_PLC_gamma; Phospholipase C-gamma (PLC-gamma) pleckstrin homology (PH) domain
    cd15898
    Location:144 → 173
    EFh_PI-PLC; EF-hand motif [structural motif]
    cl14615
    Location:910 → 1025
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    cl17036
    Location:762 → 816
    SH3; Src Homology 3 domain superfamily
    cl17171
    Location:827 → 897
    PH-like; Pleckstrin homology-like domain
    cl28895
    Location:144 → 296
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
Nucleotide Protein
Heading Accession and Version

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