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plcg2 phospholipase C, gamma 2 [ Danio rerio (zebrafish) ]

Gene ID: 561747, updated on 25-Aug-2020

Summary

Official Symbol
plcg2provided by ZNC
Official Full Name
phospholipase C, gamma 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-9532
See related
Ensembl:ENSDARG00000068763
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fj85b03; sb:eu106; sb:eu1064; wu:fj85b03; zgc:152893; si:ch211-260p9.2
Orthologs

Genomic context

See plcg2 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
33
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (13248956..13293642)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (13280444..13325130)
103 previous assembly Zv9 (GCF_000002035.4) 18 NC_007129.5 (12725632..12770318)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene coactosin-like F-actin binding protein 1 Neighboring gene MTOR associated protein, eak-7 homolog Neighboring gene si:ch211-260p9.3 Neighboring gene c-Maf inducing protein

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 
phosphoric diester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 
lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 
lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
phospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 
signal transduction IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2
NP_001038433.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001044968.1NP_001038433.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2

    Status: PROVISIONAL

    Source sequence(s)
    BX511124
    UniProtKB/TrEMBL
    Q1LWV8
    Related
    ENSDARP00000075155.4, ENSDART00000080709.6
    Conserved Domains (8) summary
    cd00275
    Location:10441169
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08628
    Location:307442
    PI-PLCc_gamma2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2
    cd09932
    Location:631734
    SH2_C-SH2_PLC_gamma_like; C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma
    cd10341
    Location:516617
    SH2_N-SH2_PLC_gamma_like; N-terminal Src homology 2 (N-SH2) domain in Phospholipase C gamma
    cd11969
    Location:762816
    SH3_PLCgamma2; Src homology 3 domain of Phospholipase C (PLC) gamma 2
    cd13362
    Location:22139
    PH_PLC_gamma; Phospholipase C-gamma (PLC-gamma) pleckstrin homology (PH) domain
    cl14615
    Location:8921017
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    cl17171
    Location:826893
    PH-like; Pleckstrin homology-like domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    13248956..13293642
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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