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agmat agmatinase (putative) [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109640817, updated on 18-Mar-2024

Summary

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Gene symbol
agmat
Gene description
agmatinase (putative)
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
human zebrafish all
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Genomic context

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See agmat in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859765.1 (361..2296)

NW_017859765.1Genomic Context describing neighboring genes Neighboring gene heparan sulfate proteoglycan 2 Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859765.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables agmatinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in putrescine biosynthetic process from arginine, using agmatinase IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
agmatinase, mitochondrial
Names
agmatinase
agmatine ureohydrolase (agmatinase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859765.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    361..2296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020105007.1 → XP_019960566.1  agmatinase, mitochondrial

    Conserved Domains (1) summary
    cd11592
    Location:14 → 203
    Agmatinase_PAH; Agmatinase-like family includes proclavaminic acid amidinohydrolase
Nucleotide Protein
Heading Accession and Version

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