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lysmd1 LysM, putative peptidoglycan-binding, domain containing 1 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109633152, updated on 14-Mar-2024

Summary

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Gene symbol
lysmd1
Gene description
LysM, putative peptidoglycan-binding, domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859661.1 (10429007..10430489)

NW_017859661.1Genomic Context describing neighboring genes Neighboring gene tropomodulin 4 (muscle) Neighboring gene sodium channel modifier 1 Neighboring gene tumor necrosis factor, alpha-induced protein 8-like 2b Neighboring gene soluble guanylate cyclase 88E-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859661.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
lysM and putative peptidoglycan-binding domain-containing protein 1
Names
LysM domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859661.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    10429007..10430489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020092787.1 → XP_019948346.1  lysM and putative peptidoglycan-binding domain-containing protein 1

    Conserved Domains (1) summary
    cd00118
    Location:40 → 84
    LysM; Lysine Motif is a small domain involved in binding peptidoglycan
Nucleotide Protein
Heading Accession and Version

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