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osr2 odd-skipped related transciption factor 2 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109632084, updated on 14-Mar-2024

Summary

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Gene symbol
osr2
Gene description
odd-skipped related transciption factor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859658.1 (1271632..1275524, complement)

NW_017859658.1Genomic Context describing neighboring genes Neighboring gene F-box protein 43 Neighboring gene regulator of G protein signaling 22 Neighboring gene vacuolar protein sorting 13 homolog B Neighboring gene uncharacterized LOC109632130 Neighboring gene potassium voltage-gated channel modifier subfamily S member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859658.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryo development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in urogenital system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein odd-skipped-related 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859658.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    1271632..1275524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020091205.1 → XP_019946764.1  protein odd-skipped-related 2 isoform X2

    Conserved Domains (3) summary
    sd00017
    Location:173 → 193
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:171 → 193
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:213 → 236
    zf-H2C2_2; Zinc-finger double domain

  2. XM_020091204.1 → XP_019946763.1  protein odd-skipped-related 2 isoform X1

    Conserved Domains (2) summary
    COG5048
    Location:171 → 308
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:173 → 193
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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