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SPATA6L spermatogenesis associated 6 like [ Bos indicus (zebu cattle) ]

Gene ID: 109562911, updated on 19-Jun-2024

Summary

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Gene symbol
SPATA6L
Gene description
spermatogenesis associated 6 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 8 NC_032657.1 (42063078..42125823)

Chromosome 8 - NC_032657.1Genomic Context describing neighboring genes Neighboring gene small EDRK-rich factor 2 pseudogene Neighboring gene cell division cycle 37 like 1, HSP90 cochaperone Neighboring gene adenylate kinase 3 Neighboring gene phospholipid phosphatase 6 Neighboring gene solute carrier family 1 member 1 Neighboring gene zinc finger protein GLIS3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032657.1 Chromosome 8 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables myosin light chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermatogenesis associated 6-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032657.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    42063078..42125823
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019966008.1 → XP_019821567.1  spermatogenesis associated 6-like protein isoform X6

    UniProtKB/TrEMBL
    A0A6P5C8V1
    Conserved Domains (1) summary
    pfam14909
    Location:27 → 165
    SPATA6; Spermatogenesis-assoc protein 6

  2. XM_019966010.1 → XP_019821569.1  spermatogenesis associated 6-like protein isoform X7

    UniProtKB/TrEMBL
    A0A6P5C7L3
    Conserved Domains (1) summary
    pfam14909
    Location:27 → 165
    SPATA6; Spermatogenesis-assoc protein 6

  3. XM_019966004.1 → XP_019821563.1  spermatogenesis associated 6-like protein isoform X2

    UniProtKB/TrEMBL
    A0A6P5C7X2
    Conserved Domains (1) summary
    pfam14909
    Location:27 → 165
    SPATA6; Spermatogenesis-assoc protein 6

  4. XM_019966005.1 → XP_019821564.1  spermatogenesis associated 6-like protein isoform X3

    UniProtKB/TrEMBL
    A0A6P5C7K9
    Conserved Domains (1) summary
    pfam14909
    Location:27 → 151
    SPATA6; Spermatogenesis-assoc protein 6

  5. XM_019966003.1 → XP_019821562.1  spermatogenesis associated 6-like protein isoform X1

    UniProtKB/TrEMBL
    A0A6P5C8U7
    Conserved Domains (1) summary
    pfam14909
    Location:27 → 165
    SPATA6; Spermatogenesis-assoc protein 6

  6. XM_019966007.1 → XP_019821566.1  spermatogenesis associated 6-like protein isoform X5

    UniProtKB/TrEMBL
    A0A6P5C7E0
    Conserved Domains (1) summary
    pfam14909
    Location:27 → 165
    SPATA6; Spermatogenesis-assoc protein 6

  7. XM_019966006.1 → XP_019821565.1  spermatogenesis associated 6-like protein isoform X4

    UniProtKB/TrEMBL
    A0A6P5C7K8
    Conserved Domains (1) summary
    pfam14909
    Location:27 → 165
    SPATA6; Spermatogenesis-assoc protein 6

RNA

  1. XR_002181243.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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