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GLIPR1 GLI pathogenesis related 1 [ Bos indicus (zebu cattle) ]

Gene ID: 109558876, updated on 14-Mar-2024

Summary

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Gene symbol
GLIPR1
Gene description
GLI pathogenesis related 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 5 NC_032654.1 (5233315..5302639)

Chromosome 5 - NC_032654.1Genomic Context describing neighboring genes Neighboring gene GLIPR1 like 1 Neighboring gene GLIPR1 like 2 Neighboring gene uncharacterized LOC109558877 Neighboring gene KRR1 small subunit processome component homolog Neighboring gene uncharacterized LOC109558878 Neighboring gene HAUS augmin-like complex subunit 8 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032654.1 Chromosome 5 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glioma pathogenesis-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032654.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    5233315..5302639
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019960198.1 → XP_019815757.1  glioma pathogenesis-related protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5BEW6
    Conserved Domains (1) summary
    cd05385
    Location:38 → 184
    SCP_GLIPR-1_like; SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich ...

  2. XM_019960199.1 → XP_019815758.1  glioma pathogenesis-related protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P5BC00
    Conserved Domains (1) summary
    cd05385
    Location:38 → 184
    SCP_GLIPR-1_like; SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich ...

  3. XM_019960197.1 → XP_019815756.1  glioma pathogenesis-related protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5BEW6
    Conserved Domains (1) summary
    cd05385
    Location:38 → 184
    SCP_GLIPR-1_like; SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich ...
Nucleotide Protein
Heading Accession and Version

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