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gria2b glutamate receptor, ionotropic, AMPA 2b [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109526263, updated on 14-Mar-2024

Summary

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Gene symbol
gria2b
Gene description
glutamate receptor, ionotropic, AMPA 2b
See related
Ensembl:ENSHCOG00000009007
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Also known as
gria2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805829.1 (1366687..1417979, complement)

NW_017805829.1Genomic Context describing neighboring genes Neighboring gene homeodomain-interacting protein kinase 2-like Neighboring gene uncharacterized LOC109526264 Neighboring gene glycine receptor, beta b Neighboring gene uncharacterized LOC109526275 Neighboring gene platelet derived growth factor c

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805829.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMPA glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AMPA glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate receptor 2
Names
glutamate ionotropic receptor AMPA type subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805829.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    1366687..1417979 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019887444.1 → XP_019743003.1  glutamate receptor 2 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2YSZ4
    Conserved Domains (2) summary
    cd13715
    Location:416 → 796
    PBP2_iGluR_AMPA; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtypes of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    cl10011
    Location:33 → 401
    Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily

  2. XM_019887443.1 → XP_019743002.1  glutamate receptor 2 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2YSZ4
    Conserved Domains (2) summary
    cd13715
    Location:416 → 796
    PBP2_iGluR_AMPA; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtypes of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    cl10011
    Location:33 → 401
    Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily

  3. XM_019887441.1 → XP_019743000.1  glutamate receptor 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2YSZ4
    Conserved Domains (2) summary
    cd13715
    Location:416 → 796
    PBP2_iGluR_AMPA; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtypes of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    cl10011
    Location:33 → 401
    Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily

  4. XM_019887442.1 → XP_019743001.1  glutamate receptor 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2YSZ4
    Related
    ENSHCOP00000021832.1, ENSHCOT00000002606.1
    Conserved Domains (2) summary
    cd13715
    Location:416 → 796
    PBP2_iGluR_AMPA; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtypes of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    cl10011
    Location:33 → 401
    Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily
Nucleotide Protein
Heading Accession and Version

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