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socs7 suppressor of cytokine signaling 7 [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109512627, updated on 14-Mar-2024

Summary

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Gene symbol
socs7
Gene description
suppressor of cytokine signaling 7
See related
Ensembl:ENSHCOG00000001990
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805065.1 (91636..99747, complement)

NW_017805065.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family C (CFTR/MRP), member 10 Neighboring gene sp2 transcription factor Neighboring gene G protein-coupled receptor 179 Neighboring gene mitochondrial ribosomal protein L45

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805065.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
suppressor of cytokine signaling 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805065.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    91636..99747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019864501.1 → XP_019720060.1  suppressor of cytokine signaling 7

    UniProtKB/TrEMBL
    A0A3Q3D2U2
    Related
    ENSHCOP00000001084.1, ENSHCOT00000012693.1
    Conserved Domains (2) summary
    cd10388
    Location:533 → 633
    SH2_SOCS7; Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins
    cd03741
    Location:657 → 705
    SOCS_SOCS7; SOCS (suppressors of cytokine signaling) box of SOCS7-like proteins. Together with CIS1, the CIS/SOCS family of proteins is characterized by the presence of a C-terminal SOCS box and a central SH2 domain. SOCS7 is important in the functioning of neuronal ...
Nucleotide Protein
Heading Accession and Version

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