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PUM1 pumilio RNA binding family member 1 [ Gavialis gangeticus (Gharial) ]

Gene ID: 109293980, updated on 14-Mar-2024

Summary

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Gene symbol
PUM1
Gene description
pumilio RNA binding family member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavialis gangeticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Gavialidae; Gavialinae; Gavialis
Orthologs
human mouse all
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Genomic context

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See PUM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current GavGan_comp1 (GCF_001723915.1) Unplaced Scaffold NW_017729015.1 (5201792..5383345)

NW_017729015.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109294248 Neighboring gene sodium/potassium transporting ATPase interacting 1 Neighboring gene uncharacterized LOC109293981 Neighboring gene syndecan 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017729015.1 Unplaced Scaffold Reference GavGan_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in miRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pumilio homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gavialis gangeticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GavGan_comp1 Primary Assembly

Genomic

  1. NW_017729015.1 Reference GavGan_comp1 Primary Assembly

    Range
    5201792..5383345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019512135.1 → XP_019367680.1  pumilio homolog 1 isoform X1

  2. XM_019512137.1 → XP_019367682.1  pumilio homolog 1 isoform X3

  3. XM_019512138.1 → XP_019367683.1  pumilio homolog 1 isoform X4

  4. XM_019512139.1 → XP_019367684.1  pumilio homolog 1 isoform X5

  5. XM_019512140.1 → XP_019367685.1  pumilio homolog 1 isoform X6

  6. XM_019512136.1 → XP_019367681.1  pumilio homolog 1 isoform X2

Nucleotide Protein
Heading Accession and Version

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