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bcas3 BCAS3 microtubule associated cell migration factor [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108932348, updated on 14-Mar-2024

Summary

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Gene symbol
bcas3
Gene description
BCAS3 microtubule associated cell migration factor
See related
Ensembl:ENSSFOG00015013222
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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See bcas3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
28
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 10 NC_041815.1 (25730176..25922270, complement)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371723.1 (5651466..5845284, complement)

Chromosome 10 - NC_041815.1Genomic Context describing neighboring genes Neighboring gene T-box transcription factor 4 Neighboring gene T-box transcription factor 2b Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent, 1Da Neighboring gene amyloid beta precursor protein (cytoplasmic tail) binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
breast carcinoma-amplified sequence 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041815.1 Reference fSclFor1.1 Primary Assembly

    Range
    25730176..25922270 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029255214.1 → XP_029111047.1  breast carcinoma-amplified sequence 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C9TN28
    Related
    ENSSFOP00015054140.1, ENSSFOT00015083564.1
    Conserved Domains (2) summary
    smart00320
    Location:339 → 374
    WD40; WD40 repeats
    pfam12490
    Location:517 → 749
    BCAS3; Breast carcinoma amplified sequence 3

  2. XM_029255213.1 → XP_029111046.1  breast carcinoma-amplified sequence 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C9TN28
    Conserved Domains (2) summary
    smart00320
    Location:339 → 374
    WD40; WD40 repeats
    pfam12490
    Location:517 → 749
    BCAS3; Breast carcinoma amplified sequence 3

  3. XM_018748625.2 → XP_018604141.2  breast carcinoma-amplified sequence 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C9TN28
    Conserved Domains (2) summary
    smart00320
    Location:355 → 390
    WD40; WD40 repeats
    pfam12490
    Location:533 → 765
    BCAS3; Breast carcinoma amplified sequence 3

  4. XM_029255212.1 → XP_029111045.1  breast carcinoma-amplified sequence 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C9TN28
    Conserved Domains (2) summary
    smart00320
    Location:355 → 390
    WD40; WD40 repeats
    pfam12490
    Location:533 → 750
    BCAS3; Breast carcinoma amplified sequence 3

  5. XM_029255215.1 → XP_029111048.1  breast carcinoma-amplified sequence 3 isoform X4

    UniProtKB/TrEMBL
    A0A8C9RXR2
    Related
    ENSSFOP00015020745.2, ENSSFOT00015020978.2
    Conserved Domains (2) summary
    smart00320
    Location:355 → 390
    WD40; WD40 repeats
    pfam12490
    Location:533 → 765
    BCAS3; Breast carcinoma amplified sequence 3
Nucleotide Protein
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