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ptprz1a protein tyrosine phosphatase receptor type Z1a [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108931606, updated on 14-Mar-2024

Summary

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Gene symbol
ptprz1a
Gene description
protein tyrosine phosphatase receptor type Z1a
See related
Ensembl:ENSSFOG00015012128
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Also known as
ptprz1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 2
Exon count:
30
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 2 NC_041807.1 (20684996..20728419, complement)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371680.1 (9174076..9218072, complement)

Chromosome 2 - NC_041807.1Genomic Context describing neighboring genes Neighboring gene FEZ family zinc finger 1 Neighboring gene aminoadipate-semialdehyde synthase Neighboring gene uncharacterized LOC114909876 Neighboring gene laminin subunit beta-1-like Neighboring gene laminin, beta 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-tyrosine dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase zeta
Names
protein tyrosine phosphatase receptor type Z1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041807.1 Reference fSclFor1.1 Primary Assembly

    Range
    20684996..20728419 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029249891.1 → XP_029105724.1  receptor-type tyrosine-protein phosphatase zeta isoform X2

    UniProtKB/TrEMBL
    A0A8C9VRU0
    Related
    ENSSFOP00015064243.1, ENSSFOT00015047169.1
    Conserved Domains (4) summary
    PTZ00449
    Location:453 → 644
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    PHA03247
    Location:459 → 1032
    PHA03247; large tegument protein UL36; Provisional
    cd03122
    Location:49 → 290
    alpha_CARP_receptor_like; Carbonic anhydrase alpha related protein, receptor_like subfamily. Carbonic anhydrase related proteins (CARPs) are sequence similar to carbonic anhydrases. Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon ...
    cl28904
    Location:1218 → 1488
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  2. XM_018747491.2 → XP_018603007.2  receptor-type tyrosine-protein phosphatase zeta isoform X1

    UniProtKB/TrEMBL
    A0A8C9VRU0
    Conserved Domains (4) summary
    PTZ00449
    Location:453 → 644
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    PHA03247
    Location:459 → 1032
    PHA03247; large tegument protein UL36; Provisional
    cd03122
    Location:49 → 290
    alpha_CARP_receptor_like; Carbonic anhydrase alpha related protein, receptor_like subfamily. Carbonic anhydrase related proteins (CARPs) are sequence similar to carbonic anhydrases. Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon ...
    cl28904
    Location:1218 → 1495
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  3. XM_029249892.1 → XP_029105725.1  receptor-type tyrosine-protein phosphatase zeta isoform X3

    UniProtKB/TrEMBL
    A0A8C9VPJ6
    Conserved Domains (4) summary
    PHA03247
    Location:435 → 601
    PHA03247; large tegument protein UL36; Provisional
    cd03122
    Location:49 → 290
    alpha_CARP_receptor_like; Carbonic anhydrase alpha related protein, receptor_like subfamily. Carbonic anhydrase related proteins (CARPs) are sequence similar to carbonic anhydrases. Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon ...
    cl21522
    Location:317 → 390
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl28904
    Location:706 → 983
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  4. XM_029249893.1 → XP_029105726.1  receptor-type tyrosine-protein phosphatase zeta isoform X4

    UniProtKB/TrEMBL
    A0A8C9VPJ6
    Related
    ENSSFOP00015062976.1, ENSSFOT00015080956.1
    Conserved Domains (4) summary
    PHA03247
    Location:435 → 601
    PHA03247; large tegument protein UL36; Provisional
    cd03122
    Location:49 → 290
    alpha_CARP_receptor_like; Carbonic anhydrase alpha related protein, receptor_like subfamily. Carbonic anhydrase related proteins (CARPs) are sequence similar to carbonic anhydrases. Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon ...
    cl21522
    Location:317 → 390
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl28904
    Location:706 → 976
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
Nucleotide Protein
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