U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

itfg1 integrin alpha FG-GAP repeat containing 1 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108897702, updated on 10-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
itfg1
Gene description
integrin alpha FG-GAP repeat containing 1
See related
EnsemblRapid:ENSLCAG00010026675
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: LG2
Exon count:
18
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG2 NC_066834.1 (18609598..18740564)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017365891.1 (1490754..1621727)

Linkage Group LG2 - NC_066834.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif, 18 Neighboring gene phosphorylase kinase, beta Neighboring gene neuropilin and tolloid-like protein 2 Neighboring gene DnaJ heat shock protein family (Hsp40) member A2a

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
T-cell immunomodulatory protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066834.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    18609598..18740564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018697450.2 → XP_018552966.1  T-cell immunomodulatory protein

    UniProtKB/TrEMBL
    A0A4W6G110, A0A4W6G1A1
    Related
    ENSLCAP00010057154.1, ENSLCAT00010058706.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.