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cdk1 cyclin-dependent kinase 1 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108895329, updated on 10-Apr-2024

Summary

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Gene symbol
cdk1
Gene description
cyclin-dependent kinase 1
See related
EnsemblRapid:ENSLCAG00010034867
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG16_LG22
Exon count:
9
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG16_LG22 NC_066848.1 (21730020..21736014)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017365629.1 (555115..561090, complement)

Linkage Group LG16_LG22 - NC_066848.1Genomic Context describing neighboring genes Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 1 Neighboring gene heterogeneous nuclear ribonucleoprotein L-like Neighboring gene E3 ubiquitin-protein ligase RNF166 Neighboring gene cytosolic thiouridylase subunit 2 homolog (S. pombe)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Small-scale transcriptomics reveals differences among gonadal stages in Asian seabass (Lates calcarifer). Ravi P, et al. Reprod Biol Endocrinol, 2014 Jan 9. PMID 24405829, Free PMC Article
  2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II CTD heptapeptide repeat kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G2/M transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic G2 DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066848.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    21730020..21736014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018694070.2 → XP_018549586.1  cyclin-dependent kinase 1 isoform X2

    Related
    ENSLCAP00010028139.2, ENSLCAT00010028749.2

  2. XM_018694069.2 → XP_018549585.2  cyclin-dependent kinase 1 isoform X1

    UniProtKB/TrEMBL
    A0A4W6DTA0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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