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rab12 RAB12, member RAS oncogene family [ Lates calcarifer (barramundi perch) ]

Gene ID: 108884241, updated on 10-Apr-2024

Summary

Gene symbol
rab12
Gene description
RAB12, member RAS oncogene family
See related
EnsemblRapid:ENSLCAG00010024857
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
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Genomic context

See rab12 in Genome Data Viewer
Location:
chromosome: LG4
Exon count:
6
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG4 NC_066836.1 (6023086..6033051)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017363893.1 (2105588..2115548, complement)

Linkage Group LG4 - NC_066836.1Genomic Context describing neighboring genes Neighboring gene piezo-type mechanosensitive ion channel component 2 Neighboring gene microtubule cross-linking factor 1 Neighboring gene N-ethylmaleimide-sensitive factor attachment protein, gamma b Neighboring gene acyl-CoA synthetase short chain family member 2 like

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in Golgi vesicle fusion to target membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in protein secretion IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of exocytosis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in vesicle docking involved in exocytosis IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in trans-Golgi network transport vesicle IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066836.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    6023086..6033051
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018678033.2XP_018533549.1  ras-related protein Rab-12

    UniProtKB/TrEMBL
    A0A4W6FQF8
    Related
    ENSLCAP00010053460.1, ENSLCAT00010054828.2