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ATP6V0D1 ATPase H+ transporting V0 subunit d1 [ Lepidothrix coronata (blue-crowned manakin) ]

Gene ID: 108501941, updated on 3-Aug-2024

Summary

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Gene symbol
ATP6V0D1
Gene description
ATPase H+ transporting V0 subunit d1
See related
Ensembl:ENSLCOG00000015398
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepidothrix coronata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Lepidothrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Lepidothrix_coronata-1.0 (GCF_001604755.1) Unplaced Scaffold NW_016690290.1 (1972298..2006393)

NW_016690290.1Genomic Context describing neighboring genes Neighboring gene SNF-related serine/threonine-protein kinase-like Neighboring gene agouti related neuropeptide Neighboring gene hydroxysteroid 11-beta dehydrogenase 2 Neighboring gene formin homology 2 domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016690290.1 Unplaced Scaffold Reference Lepidothrix_coronata-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of plasma membrane proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit d 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepidothrix coronata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lepidothrix_coronata-1.0

Genomic

  1. NW_016690290.1 Reference Lepidothrix_coronata-1.0

    Range
    1972298..2006393
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017824310.1 → XP_017679799.1  V-type proton ATPase subunit d 1

    UniProtKB/TrEMBL
    A0A6J0I1T2
    Related
    ENSLCOP00000021796.1, ENSLCOT00000023046.1
    Conserved Domains (1) summary
    pfam01992
    Location:16 → 339
    vATP-synt_AC39; ATP synthase (C/AC39) subunit
Nucleotide Protein
Heading Accession and Version

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