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PTPMT1 protein tyrosine phosphatase mitochondrial 1 [ Lepidothrix coronata (blue-crowned manakin) ]

Gene ID: 108495544, updated on 3-Aug-2024

Summary

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Gene symbol
PTPMT1
Gene description
protein tyrosine phosphatase mitochondrial 1
See related
Ensembl:ENSLCOG00000012904
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepidothrix coronata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Lepidothrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Lepidothrix_coronata-1.0 (GCF_001604755.1) Unplaced Scaffold NW_016690181.1 (4505307..4507511)

NW_016690181.1Genomic Context describing neighboring genes Neighboring gene receptor associated protein of the synapse Neighboring gene CUGBP Elav-like family member 1 Neighboring gene uncharacterized LOC108495552 Neighboring gene kelch repeat and BTB domain containing 4 Neighboring gene NADH:ubiquinone oxidoreductase core subunit S3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016690181.1 Unplaced Scaffold Reference Lepidothrix_coronata-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylglycerophosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepidothrix coronata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lepidothrix_coronata-1.0

Genomic

  1. NW_016690181.1 Reference Lepidothrix_coronata-1.0

    Range
    4505307..4507511
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017811351.1 → XP_017666840.1  phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1

    UniProtKB/TrEMBL
    A0A6J0GYJ2
    Related
    ENSLCOP00000018259.1, ENSLCOT00000019283.1
Nucleotide Protein
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