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TDO2 tryptophan 2,3-dioxygenase [ Lepidothrix coronata (blue-crowned manakin) ]

Gene ID: 108492977, updated on 3-Aug-2024

Summary

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Gene symbol
TDO2
Gene description
tryptophan 2,3-dioxygenase
See related
Ensembl:ENSLCOG00000004696
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepidothrix coronata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Lepidothrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Lepidothrix_coronata-1.0 (GCF_001604755.1) Unplaced Scaffold NW_016690193.1 (5166300..5179014)

NW_016690193.1Genomic Context describing neighboring genes Neighboring gene guanylate cyclase 1 soluble subunit beta 1 Neighboring gene acid sensing ion channel subunit family member 5 Neighboring gene cathepsin O Neighboring gene uncharacterized LOC108492936

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016690193.1 Unplaced Scaffold Reference Lepidothrix_coronata-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tryptophan 2,3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan catabolic process to acetyl-CoA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tryptophan catabolic process to kynurenine IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tryptophan 2,3-dioxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepidothrix coronata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lepidothrix_coronata-1.0

Genomic

  1. NW_016690193.1 Reference Lepidothrix_coronata-1.0

    Range
    5166300..5179014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017805850.1 → XP_017661339.1  tryptophan 2,3-dioxygenase

    UniProtKB/TrEMBL
    A0A6J0GHL2
    Related
    ENSLCOP00000006336.1, ENSLCOT00000006762.1
Nucleotide Protein
Heading Accession and Version

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