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irf2 interferon regulatory factor 2 [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108431122, updated on 18-Jun-2024

Summary

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Gene symbol
irf2
Gene description
interferon regulatory factor 2
See related
Ensembl:ENSPNAG00000024804
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 8 NC_051218.1 (17008214..17026829)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016243852.1 (852473..871085)

Chromosome 8 - NC_051218.1Genomic Context describing neighboring genes Neighboring gene caspase-3-like Neighboring gene caspase-3-like Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 6 Neighboring gene sorting nexin 25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon regulatory factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051218.1 Reference fPygNat1.pri

    Range
    17008214..17026829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017704074.2 → XP_017559563.1  interferon regulatory factor 2 isoform X2

    UniProtKB/TrEMBL
    A0A3B4EEY9, A0A3B4EH55
    Related
    ENSPNAP00000035092.1, ENSPNAT00000038954.2

  2. XM_017704073.2 → XP_017559562.1  interferon regulatory factor 2 isoform X1

    UniProtKB/TrEMBL
    A0A3B4EH55
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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