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agtpbp1 ATP/GTP binding carboxypeptidase 1 [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108426729, updated on 18-Jun-2024

Summary

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Gene symbol
agtpbp1
Gene description
ATP/GTP binding carboxypeptidase 1
See related
Ensembl:ENSPNAG00000017295
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Orthologs
human zebrafish all
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Genomic context

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See agtpbp1 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
29
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 29 NC_051239.1 (12199738..12232823)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016243799.1 (3491301..3524335)

Chromosome 29 - NC_051239.1Genomic Context describing neighboring genes Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 Neighboring gene golgi membrane protein 1 Neighboring gene N-alpha-acetyltransferase 35, NatC auxiliary subunit Neighboring gene neurotrophic tyrosine kinase, receptor, type 2a Neighboring gene RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in C-terminal protein deglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein side chain deglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic carboxypeptidase 1
Names
ATP/GTP binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051239.1 Reference fPygNat1.pri

    Range
    12199738..12232823
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017696434.2 → XP_017551923.1  cytosolic carboxypeptidase 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B4CM59
    Related
    ENSPNAP00000054400.1, ENSPNAT00000057670.1
    Conserved Domains (2) summary
    cd06906
    Location:804 → 1074
    M14_Nna1; Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases
    pfam18027
    Location:648 → 782
    Pepdidase_M14_N; Cytosolic carboxypeptidase N-terminal domain

  2. XM_017696432.2 → XP_017551921.1  cytosolic carboxypeptidase 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B4CM59
    Related
    ENSPNAP00000011639.1, ENSPNAT00000018724.2
    Conserved Domains (2) summary
    cd06906
    Location:804 → 1074
    M14_Nna1; Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases
    pfam18027
    Location:648 → 782
    Pepdidase_M14_N; Cytosolic carboxypeptidase N-terminal domain

  3. XM_037536164.1 → XP_037392061.1  cytosolic carboxypeptidase 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B4CM59
    Conserved Domains (2) summary
    cd06906
    Location:804 → 1074
    M14_Nna1; Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases
    pfam18027
    Location:648 → 782
    Pepdidase_M14_N; Cytosolic carboxypeptidase N-terminal domain

  4. XM_017696435.2 → XP_017551924.1  cytosolic carboxypeptidase 1 isoform X2

    UniProtKB/TrEMBL
    A0A3B4CHZ6
    Related
    ENSPNAP00000011627.1, ENSPNAT00000036201.2
Nucleotide Protein
Heading Accession and Version

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