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rrp36 ribosomal RNA processing 36 [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108411471, updated on 18-Jun-2024

Summary

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Gene symbol
rrp36
Gene description
ribosomal RNA processing 36
See related
Ensembl:ENSPNAG00000027207
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Orthologs
human zebrafish all
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Genomic context

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See rrp36 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
8
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 15 NC_051225.1 (18243655..18253524)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016244550.1 (103656..113035)

Chromosome 15 - NC_051225.1Genomic Context describing neighboring genes Neighboring gene uncharacterized si:dkey-238i5.2 Neighboring gene uncharacterized LOC108411474 Neighboring gene uncharacterized LOC108411473 Neighboring gene transmembrane protein 121-like Neighboring gene phosphofurin acidic cluster sorting protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosomal RNA processing protein 36 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051225.1 Reference fPygNat1.pri

    Range
    18243655..18253524
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017683048.2 → XP_017538537.1  ribosomal RNA processing protein 36 homolog

    UniProtKB/TrEMBL
    A0A3B4DAB3
    Related
    ENSPNAP00000020388.1, ENSPNAT00000030909.2
Nucleotide Protein
Heading Accession and Version

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