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ZNF446 zinc finger protein 446 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108408239, updated on 14-Mar-2024

Summary

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Gene symbol
ZNF446
Gene description
zinc finger protein 446
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436138.1 (899035..910332)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016544603.1 (5397..16536)

NW_023436138.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 584 Neighboring gene zinc finger protein 132-like Neighboring gene solute carrier family 27 member 5 Neighboring gene zinc finger and BTB domain containing 45

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 446

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436138.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    899035..910332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036993020.1 → XP_036848915.1  zinc finger protein 446 isoform X3

    Conserved Domains (5) summary
    smart00355
    Location:377 → 399
    ZnF_C2H2; zinc finger
    sd00017
    Location:322 → 342
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:202 → 241
    KRAB; KRAB box
    cd20908
    Location:382 → 423
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
    cl02605
    Location:22 → 126
    SCAN; SCAN oligomerization domain

  2. XM_036993019.1 → XP_036848914.1  zinc finger protein 446 isoform X3

    Conserved Domains (5) summary
    smart00355
    Location:377 → 399
    ZnF_C2H2; zinc finger
    sd00017
    Location:322 → 342
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:202 → 241
    KRAB; KRAB box
    cd20908
    Location:382 → 423
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
    cl02605
    Location:22 → 126
    SCAN; SCAN oligomerization domain

  3. XM_017678131.2 → XP_017533620.2  zinc finger protein 446 isoform X3

    Conserved Domains (5) summary
    smart00355
    Location:377 → 399
    ZnF_C2H2; zinc finger
    sd00017
    Location:322 → 342
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:202 → 241
    KRAB; KRAB box
    cd20908
    Location:382 → 423
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
    cl02605
    Location:22 → 126
    SCAN; SCAN oligomerization domain

  4. XM_036993018.1 → XP_036848913.1  zinc finger protein 446 isoform X3

    Conserved Domains (5) summary
    smart00355
    Location:377 → 399
    ZnF_C2H2; zinc finger
    sd00017
    Location:322 → 342
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:202 → 241
    KRAB; KRAB box
    cd20908
    Location:382 → 423
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
    cl02605
    Location:22 → 126
    SCAN; SCAN oligomerization domain

  5. XM_017678127.2 → XP_017533616.2  zinc finger protein 446 isoform X3

    Conserved Domains (5) summary
    smart00355
    Location:377 → 399
    ZnF_C2H2; zinc finger
    sd00017
    Location:322 → 342
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:202 → 241
    KRAB; KRAB box
    cd20908
    Location:382 → 423
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
    cl02605
    Location:22 → 126
    SCAN; SCAN oligomerization domain

  6. XM_036993021.1 → XP_036848916.1  zinc finger protein 446 isoform X4

    Conserved Domains (5) summary
    smart00355
    Location:499 → 521
    ZnF_C2H2; zinc finger
    sd00017
    Location:444 → 464
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:314 → 353
    KRAB; KRAB box
    cd20908
    Location:504 → 545
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
    cl02605
    Location:134 → 238
    SCAN; SCAN oligomerization domain

  7. XM_017678124.2 → XP_017533613.2  zinc finger protein 446 isoform X1

    Conserved Domains (5) summary
    smart00355
    Location:489 → 511
    ZnF_C2H2; zinc finger
    sd00017
    Location:434 → 454
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:314 → 353
    KRAB; KRAB box
    cd20908
    Location:494 → 535
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
    cl02605
    Location:134 → 238
    SCAN; SCAN oligomerization domain

  8. XM_017678125.2 → XP_017533614.2  zinc finger protein 446 isoform X2

    Conserved Domains (5) summary
    smart00355
    Location:398 → 420
    ZnF_C2H2; zinc finger
    sd00017
    Location:343 → 363
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:223 → 262
    KRAB; KRAB box
    cd20908
    Location:403 → 444
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
    cl02605
    Location:43 → 147
    SCAN; SCAN oligomerization domain
Nucleotide Protein
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