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CCN5 cellular communication network factor 5 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108312997, updated on 14-Mar-2024

Summary

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Gene symbol
CCN5
Gene description
cellular communication network factor 5
See related
Ensembl:ENSCCAG00000027495
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Also known as
WISP2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107447.1 (646597..658992)

NW_016107447.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L7a-like Neighboring gene cAMP-dependent protein kinase inhibitor gamma Neighboring gene uncharacterized LOC108312996 Neighboring gene U6 spliceosomal RNA Neighboring gene adenosine deaminase Neighboring gene potassium two pore domain channel subfamily K member 15 Neighboring gene regulating synaptic membrane exocytosis 4 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107447 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCN family member 5
Names
WNT1 inducible signaling pathway protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107447.1 Reference Cebus_imitator-1.0

    Range
    646597..658992
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017541188.2 → XP_017396677.2  CCN family member 5

    UniProtKB/TrEMBL
    A0A2K5QTT3
    Related
    ENSCCAP00000019287.1, ENSCCAT00000036768.1
    Conserved Domains (3) summary
    cl17735
    Location:100 → 159
    VWC; von Willebrand factor type C domain
    pfam00219
    Location:26 → 65
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:194 → 237
    TSP1_CCN; CCN3 Nov like TSP1 domain
Nucleotide Protein
Heading Accession and Version

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