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CAPN2 calpain 2 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108302703, updated on 14-Mar-2024

Summary

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Gene symbol
CAPN2
Gene description
calpain 2
See related
Ensembl:ENSCCAG00000021862
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107357.1 (6616371..6678139)

NW_016107357.1Genomic Context describing neighboring genes Neighboring gene calpain 8 Neighboring gene small nuclear ribonucleoprotein E-like Neighboring gene 3'(2'),5'-bisphosphate nucleotidase 1-like Neighboring gene tumor protein p53 binding protein 2 Neighboring gene 60S ribosomal protein L23a-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107357 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain-2 catalytic subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107357.1 Reference Cebus_imitator-1.0

    Range
    6616371..6678139
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037737721.1 → XP_037593649.1  calpain-2 catalytic subunit

    UniProtKB/TrEMBL
    A0A2K5PXM8, A0A2K5PXQ1
    Related
    ENSCCAP00000008386.1, ENSCCAT00000025764.1
    Conserved Domains (3) summary
    cd00214
    Location:354 → 512
    Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
    cd16199
    Location:533 → 700
    EFh_PEF_CAPN2; Penta-EF hand, calcium binding motifs, found in m-type calpain (CAPN2)
    pfam00648
    Location:46 → 342
    Peptidase_C2; Calpain family cysteine protease
Nucleotide Protein
Heading Accession and Version

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