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TOM1 target of myb1 membrane trafficking protein [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108286314, updated on 14-Mar-2024

Summary

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Gene symbol
TOM1
Gene description
target of myb1 membrane trafficking protein
See related
Ensembl:ENSCCAG00000029278
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107632.1 (1944928..1991838)

NW_016107632.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L10-like Neighboring gene HMG-box containing 4 Neighboring gene heme oxygenase 1 Neighboring gene 40S ribosomal protein S2-like Neighboring gene minichromosome maintenance complex component 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107632 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
target of Myb protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107632.1 Reference Cebus_imitator-1.0

    Range
    1944928..1991838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037729758.1 → XP_037585686.1  target of Myb protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A2K5R4A9
    Conserved Domains (2) summary
    cd14236
    Location:181 → 275
    GAT_TOM1; canonical GAT domain found in target of Myb protein 1 (Tom1)
    cl02544
    Location:1 → 115
    VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily

  2. XM_017504020.2 → XP_017359509.1  target of Myb protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A2K5R4A9

  3. XM_017504021.2 → XP_017359510.1  target of Myb protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A2K5R4A9

  4. XM_017504022.2 → XP_017359511.1  target of Myb protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A2K5R4A9

  5. XM_017504018.2 → XP_017359507.1  target of Myb protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5R4A9, A0A2K5R4B7
    Related
    ENSCCAP00000022977.1, ENSCCAT00000040478.1

  6. XM_017504019.2 → XP_017359508.1  target of Myb protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A2K5R4A9

  7. XM_017504016.2 → XP_017359505.1  target of Myb protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5R4A9

  8. XM_017504017.2 → XP_017359506.1  target of Myb protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5R4A9
    Related
    ENSCCAP00000022984.1, ENSCCAT00000040485.1
Nucleotide Protein
Heading Accession and Version

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