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stk38l serine/threonine kinase 38 like [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108279826, updated on 20-Aug-2024

Summary

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Gene symbol
stk38l
Gene description
serine/threonine kinase 38 like
See related
EnsemblRapid:ENSIPUG00020002276
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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See stk38l in Genome Data Viewer
Location:
chromosome: 19
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 19 NC_030434.2 (3901575..3920203, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 19 NC_030434.1 (2022478..2039502, complement)

Chromosome 19 - NC_030434.2Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 13 Neighboring gene ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) Neighboring gene nuclear respiratory factor 1 Neighboring gene transportin 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase 38-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030434.2 Reference Coco_2.0 Primary Assembly

    Range
    3901575..3920203 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017494328.3 → XP_017349817.1  serine/threonine-protein kinase 38-like isoform X1

    UniProtKB/TrEMBL
    A0A2D0T4H8
    Related
    ENSIPUP00020005364.1, ENSIPUT00020005649.1

  2. XM_017494330.3 → XP_017349819.1  serine/threonine-protein kinase 38-like isoform X3

    UniProtKB/TrEMBL
    A0A2D0T4J0
    Related
    ENSIPUP00020005367.1, ENSIPUT00020005653.1

  3. XM_017494329.3 → XP_017349818.1  serine/threonine-protein kinase 38-like isoform X2

    UniProtKB/TrEMBL
    A0A2D0T4I6

  4. XM_017494331.3 → XP_017349820.1  serine/threonine-protein kinase 38-like isoform X4

    UniProtKB/TrEMBL
    A0A2D0T5D7
    Related
    ENSIPUP00020005319.1, ENSIPUT00020005577.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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