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phlpp2 PH domain and leucine rich repeat protein phosphatase 2 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108270694, updated on 20-Aug-2024

Summary

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Gene symbol
phlpp2
Gene description
PH domain and leucine rich repeat protein phosphatase 2
See related
EnsemblRapid:ENSIPUG00020033386
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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See phlpp2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 10 NC_030425.2 (28422078..28475107, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 10 NC_030425.1 (1972169..2021851)

Chromosome 10 - NC_030425.2Genomic Context describing neighboring genes Neighboring gene cysteine-rich secretory protein LCCL domain containing 2 Neighboring gene ubiquitin specific peptidase 10 Neighboring gene MARVEL domain containing 3 Neighboring gene adaptor related protein complex 1 subunit gamma 1 Neighboring gene zinc finger protein 821

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Liu S, et al. BMC Genomics, 2012 Nov 5. PMID 23127152, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PH domain leucine-rich repeat-containing protein phosphatase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030425.2 Reference Coco_2.0 Primary Assembly

    Range
    28422078..28475107 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017477525.3 → XP_017333014.1  PH domain leucine-rich repeat-containing protein phosphatase 2 isoform X1

    UniProtKB/TrEMBL
    A0A2D0RR89
    Related
    ENSIPUP00020060240.1, ENSIPUT00020080319.1

  2. XM_017477527.3 → XP_017333016.1  PH domain leucine-rich repeat-containing protein phosphatase 2 isoform X2

    UniProtKB/TrEMBL
    A0A2D0RS69
Nucleotide Protein
Heading Accession and Version

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