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dcun1d3 defective in cullin neddylation 1 domain containing 3 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108269992, updated on 20-Aug-2024

Summary

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Gene symbol
dcun1d3
Gene description
defective in cullin neddylation 1 domain containing 3
See related
EnsemblRapid:ENSIPUG00020023403
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 1 NC_030416.2 (37813743..37829355, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 1 NC_030416.1 (36742611..36753565)

Chromosome 1 - NC_030416.2Genomic Context describing neighboring genes Neighboring gene NACHT, LRR and PYD domains-containing protein 12 Neighboring gene cytochrome c oxidase subunit 6B1 Neighboring gene katanin interacting protein Neighboring gene LYR motif containing 1 Neighboring gene N-lysine methyltransferase KMT5A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cullin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-like protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein neddylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DCN1-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030416.2 Reference Coco_2.0 Primary Assembly

    Range
    37813743..37829355 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053684803.1 → XP_053540778.1  DCN1-like protein 3

    UniProtKB/TrEMBL
    W5URL7
    Related
    ENSIPUP00020045902.1, ENSIPUT00020056347.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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