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syt13 synaptotagmin XIII [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108259142, updated on 20-Aug-2024

Summary

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Gene symbol
syt13
Gene description
synaptotagmin XIII
See related
EnsemblRapid:ENSIPUG00020026182
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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See syt13 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 27 NC_030442.2 (5557595..5578490)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 27 NC_030442.1 (13510134..13531559, complement)

Chromosome 27 - NC_030442.2Genomic Context describing neighboring genes Neighboring gene CD59 molecule (CD59 blood group) a Neighboring gene F-box protein 3 Neighboring gene zinc finger protein 408 Neighboring gene coagulation factor II (thrombin)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylserine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables syntaxin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium-ion regulated exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of calcium ion-dependent exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dopamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptotagmin-13
Names
Synaptotagmin-13
synaptotagmin 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030442.2 Reference Coco_2.0 Primary Assembly

    Range
    5557595..5578490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017458365.3 → XP_017313854.1  synaptotagmin-13

    UniProtKB/TrEMBL
    A0A2D0Q6B9, W5UF91
    Related
    ENSIPUP00020050030.1, ENSIPUT00020063046.1
Nucleotide Protein
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Gene LinkOut

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