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xkr4 XK related 4 [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108250419, updated on 10-Apr-2024

Summary

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Gene symbol
xkr4
Gene description
XK related 4
See related
EnsemblRapid:ENSKMAG00010002786
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG20
Exon count:
6
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG20 NC_051449.1 (26507651..26550658, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094851.1 (32585..75862, complement)

Linkage Group LG20 - NC_051449.1Genomic Context describing neighboring genes Neighboring gene trimethylguanosine synthase 1 Neighboring gene transmembrane protein 68 Neighboring gene E3 ubiquitin-protein ligase RNF31 Neighboring gene potassium voltage-gated channel subfamily B member 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process involved in development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in engulfment of apoptotic cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylserine exposure on apoptotic cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
XK-related protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051449.1 Reference ASM164957v2 Primary Assembly

    Range
    26507651..26550658 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037972984.1 → XP_037828912.1  XK-related protein 4 isoform X2

    Conserved Domains (1) summary
    pfam09815
    Location:82 → 479
    XK-related; XK-related protein

  2. XM_017440293.3 → XP_017295782.1  XK-related protein 4 isoform X2

    Related
    ENSKMAP00010005352.1, ENSKMAT00010005688.1
    Conserved Domains (1) summary
    pfam09815
    Location:82 → 479
    XK-related; XK-related protein

  3. XM_017440292.3 → XP_017295781.1  XK-related protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2ZW91
    Related
    ENSKMAP00010005349.1, ENSKMAT00010005685.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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