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LOC108233994 zinc finger CCCH domain-containing protein 6 [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108233994, updated on 13-Apr-2024

Summary

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Gene symbol
LOC108233994
Gene description
zinc finger CCCH domain-containing protein 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Also known as
zc3h6
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG22
Exon count:
12
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG22 NC_051451.1 (24149096..24156907, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094263.1 (1202071..1209878)

Linkage Group LG22 - NC_051451.1Genomic Context describing neighboring genes Neighboring gene integrin, alpha 9 Neighboring gene uncharacterized LOC119616701 Neighboring gene fibulin-7 Neighboring gene transmembrane protein 87B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH domain-containing protein 6
Names
zinc finger CCCH-type containing 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051451.1 Reference ASM164957v2 Primary Assembly

    Range
    24149096..24156907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017412796.3 → XP_017268285.1  zinc finger CCCH domain-containing protein 6 isoform X2

  2. XM_017412795.3 → XP_017268284.1  zinc finger CCCH domain-containing protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3AZ61
Nucleotide Protein
Heading Accession and Version

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